PTM Viewer

AT4G38550.1

Arabidopsis thaliana [ath]

phospholipase-like protein (PEARLI 4) family protein

45 PTM sites : 1 PTM type

Gene Family: HOM05D002972

Other Names: NULL

Uniprot

Link out to other resources with this protein ID : TAIR | PeptideAtlas | ARAPORT | PhosPhAt

For each protein all PTMs are highlighted by default in the respective protein sequence (right-hand side). One can adjust a selection of PTMs in the PTM table on the left-hand side. In addition, functional protein domains and sites can be underlined if desired.

In the PTM table per PTM the PTM position and type is indicated, as well as the plain peptide sequence that was identified by mass spectrometry. The respective proteomics study is indicated by a number, providing a link to consult the experimental details. Additional PTM meta-data includes various confidence measures such as peptide score provided by search algorithms, posterior error probability (PEP), precursor mass deviation (in ppm) and modification site probability. The available confidence meta-data can be consulted in the extended PTM table by clicking SHOW CONFIDENCE. However, in the default PTM table, a color-coding of confidence is provided with green indicating high confidence, olive medium confidence, grey low confidence, and no color an unassigned confidence. More details regarding this confidence assignment can be consulted in the tutorial or the Plant PTM Viewer manuscript.

Besides confidence measures, log2 fold changes between two conditions with significance values (P- or Q-values) are shown if provided in the respective publication. Log2 fold changes are colored in heatmap-like gradient (green = induced, red = repressed) and significant values are highlighted in green. To determine significance, we employed the threshold used in the respective publication. For more details on the quantitative measurements we refer to the experimental details and respective publication, as methodologies can differ.

On the bottom of the page one can send the whole protein or a part of the protein (i.e. a functional domain) to PTM Blast. This will display aligned protein sequences that potentially report aligned PTMs.

PTMs

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Results

PTM Type	Mod AA	Pos	Peptide	Exp ID	Log2 FC	P/Q val	Score Type	Ident Score	Loc Prob	PEP	Mass Error (ppm)
ph	S	28	TVSKSTPGSPAHPPGAR	88			MASCOT Score	38.000	0.994		0.670
			TVSKSTPGSPAHPPGAR	114			MaxQuant score	151.570	0.989	2.469e-13
			STPGSPAHPPGAR	88			MASCOT Score	41.000	1.000		0.020
ph	S	32	STPGSPAHPPGARSPPPSYLSNK	100			XCorr	2.840	0.896	4.747e-3
			TVSKSTPGSPAHPPGAR	88			MASCOT Score	38.000	1.000		0.670
			STPGSPAHPPGAR	88			MASCOT Score	41.000	1.000		-0.070
				109					0.988
				114			MaxQuant score	121.750	1.000	5.511e-9
ph	S	41	STPGSPAHPPGARSPPPSYLSNK	48			MASCOT Score	46.610
				83			MASCOT Score	40.000			-0.001
				88			MASCOT Score	26.000	1.000		-0.460
				100			XCorr	2.840	0.935	4.747e-3
			SPPPSYLSNKR	60			MASCOT Score	40.610			-0.768
			SPPPSYLSNK	38			MASCOT Score	46.150			-0.486
				60			MASCOT Score	50.990			-0.367
				83			MASCOT Score	46.000			-0.000
				84b			XCorr	2.420	0.999	3.490e-2
				85			XCorr	2.648	1.000	6.277e-3
				88			MASCOT Score	53.000	1.000		0.060
				106			MASCOT Score	30.000
				114			MaxQuant score	201.090	1.000	0.000e+0
ph	S	45	STPGSPAHPPGARSPPPSYLSNK	100			XCorr	3.145	0.807	2.630e-2
ph	S	45	SPPPSYLSNK	88			MASCOT Score	25.000	0.892		-0.700
ph	T	54	RAETEYDFPMSNEQRPYWK	100			XCorr	4.502	0.991	3.299e-5
			AETEYDFPMSNEQRPYWK	114			MaxQuant score	126.590	1.000	9.214e-15
			RAETEYDFPMSNEQR	88			MASCOT Score	51.000	0.998		0.150
ph	S	73	QPASERVPNSHPRPPVYGYGTPDHR	114			MaxQuant score	49.464	0.815	8.968e-4
ph	T	90	VPNSHPRPPVYGYGTPDHR	100			XCorr	4.016	0.889	1.777e-8
ph	T	90	VPNSHPRPPVYGYGTPDHR	114			MaxQuant score	176.140	1.000	3.761e-29
ph	S	106	MEAMSYEPETNAPSSPYHPAGNRTPERPR	114			MaxQuant score	128.650	0.852	9.683e-43
ph	Y	107	MEAMSYEPETNAPSSPYHPAGNRTPERPR	114			MaxQuant score	97.289	0.853	3.367e-23
ph	T	111	MEAMSYEPETNAPSSPYHPAGNRTPERPR	114			MaxQuant score	163.480	0.987	0.000e+0
ph	S	115	MEAMSYEPETNAPSSPYHPAGNRTPERPRK	100			XCorr	4.032	0.756	7.972e-4
			MEAMSYEPETNAPSSPYHPAGNRTPERPR	48			MASCOT Score	60.360
				100			XCorr	4.281	0.787	1.616e-5
				114			MaxQuant score	242.900	0.905	0.000e+0
			MEAMSYEPETNAPSSPYHPAGNR	45			MaxQuant Score	67.995
			MEAMSYEPETNAPSSPYHPAGNR	106			MASCOT Score	40.000
ph	S	116	ERMEAMSYEPETNAPSSPYHPAGNRTPERPR	100			XCorr	4.585	0.954	6.542e-3
			MEAMSYEPETNAPSSPYHPAGNRTPERPR	48			MASCOT Score	26.840
			MEAMSYEPETNAPSSPYHPAGNR	44			XCorr	5.853
				83			MASCOT Score	25.000			0.003
				88			MASCOT Score	45.000	1.000		0.250
				100			XCorr	4.450	0.888	7.417e-7
				114			MaxQuant score	317.720	0.970	0.000e+0
ph	Y	118	MEAMSYEPETNAPSSPYHPAGNRTPERPR	44			XCorr	5.154
				88			MASCOT Score	28.000	0.799		-0.550
				114			MaxQuant score	265.250	0.836	0.000e+0
ph	T	125	ERMEAMSYEPETNAPSSPYHPAGNRTPERPR	100			XCorr	4.585	0.999	6.542e-3
			MEAMSYEPETNAPSSPYHPAGNRTPERPRK	100			XCorr	3.879	0.787	1.523e-2
			MEAMSYEPETNAPSSPYHPAGNRTPERPR	48			MASCOT Score	26.840
				85			XCorr	4.261	0.821	2.264e-12
				88			MASCOT Score	41.000	0.972		-0.420
				100			XCorr	4.791	0.952	6.215e-5
				114			MaxQuant score	307.310	1.000	0.000e+0
ph	S	150	SNASPFHPFR	88			MASCOT Score	32.000	1.000		0.110
ph	S	150	SNASPFHPFR	114			MaxQuant score	92.112	1.000	9.958e-4
ph	S	153	SNASPFHPFR	38			MASCOT Score	41.410			-0.093
				44			XCorr	2.699
				45			MaxQuant Score	85.813
				46			MASCOT Score	49.160			0.789
				60			MASCOT Score	37.860			-0.432
				88			MASCOT Score	42.000	1.000		0.290
				100			XCorr	3.007	1.000	7.402e-4
				106			MASCOT Score	27.000
				114			MaxQuant score	210.310	1.000	6.708e-20
				136	-0.065	0.917	MASCOT score	51.740			6.433
ph	S	160	SPSPSPFHTPDR	114			MaxQuant score	143.500	0.994	4.196e-33
ph	S	162	SPSPSPFHTPDR	88			MASCOT Score	48.000	0.996		0.690
				106			MASCOT Score	23.000
				114			MaxQuant score	215.020	1.000	6.646e-39
ph	S	164	SPSPSPFHTPDRR	100			XCorr	2.759	0.888	5.551e-2
			SPSPSPFHTPDR	44			XCorr	3.266
				88			MASCOT Score	35.000	1.000		-0.020
				114			MaxQuant score	106.820	0.997	2.080e-5
ph	T	168	SPSPSPFHTPDRR	88			MASCOT Score	35.000	0.945		-0.440
			SPSPSPFHTPDR	88			MASCOT Score	31.000	1.000		-0.700
				100			XCorr	2.976	1.000	2.221e-5
				114			MaxQuant score	177.930	1.000	3.955e-19
ph	S	190	RDHYDMYEPEANTMLQNSAPGSPFHPAGSRSPPPYR	114			MaxQuant score	55.350	0.769	9.618e-7
ph	S	190	DHYDMYEPEANTMLQNSAPGSPFHPAGSR	44			XCorr	4.741
ph	S	194	RDHYDMYEPEANTMLQNSAPGSPFHPAGSRSPPPYR	45			MaxQuant Score	124.790
			RDHYDMYEPEANTMLQNSAPGSPFHPAGSRSPPPYR	100			XCorr	4.741	0.908	5.235e-4
			DHYDMYEPEANTMLQNSAPGSPFHPAGSR	44			XCorr	6.073
				100			XCorr	5.894	0.999	5.539e-6
				106			MASCOT Score	35.000
				114			MaxQuant score	343.960	1.000	0.000e+0
ph	S	201	RDHYDMYEPEANTMLQNSAPGSPFHPAGSRSPPPYR	45			MaxQuant Score	124.790
			DHYDMYEPEANTMLQNSAPGSPFHPAGSRSPPPYR	85			XCorr	3.696	0.794	3.400e-11
			DHYDMYEPEANTMLQNSAPGSPFHPAGSRSPPPYR	100			XCorr	5.263	0.806	4.591e-4
ph	S	203	DHYDMYEPEANTMLQNSAPGSPFHPAGSRSPPPYR	85			XCorr	3.696	0.794	3.400e-11
			DHYDMYEPEANTMLQNSAPGSPFHPAGSRSPPPYR	100			XCorr	5.263	0.948	4.591e-4
			SPPPYRTPDRR	83			MASCOT Score	26.000			-0.001
			SPPPYRTPDRR	114			MaxQuant score	161.660	1.000	0.000e+0
			SPPPYRTPDR	88			MASCOT Score	30.000	0.992		-0.050
ph	T	209	SPPPYRTPDRR	83			MASCOT Score	26.000			-0.001
				100			XCorr	2.239	0.993	1.202e-2
				114			MaxQuant score	81.448	1.000	7.533e-4
			SPPPYRTPDR	88			MASCOT Score	30.000	0.918		-0.050
ph	S	214	SNYDKEQFEDLYEQDGDVTPR	44			XCorr	3.721
ph	S	214	SNYDKEQFEDLYEQDGDVTPR	114			MaxQuant score	159.890	1.000	1.331e-29
ph	T	232	EQFEDLYEQDGDVTPRNSSPPSPFHPAAYK	83			MASCOT Score	48.000			-0.005
				94			MaxQuant Score	71.470	0.995	2.000e-3	1.772
				100			XCorr	4.482	0.962	2.033e-2
			SNYDKEQFEDLYEQDGDVTPR	18a			MaxQuant Score	83.879	1.000	2.905e-8	0.233
				38			MASCOT Score	87.620			-2.112
				41			MASCOT Score	77.230
				48			MASCOT Score	28.160
				60			MASCOT Score	68.230			-0.824
				84a			XCorr	5.360	1.000	1.162e-4
				84b	1.099		XCorr	5.150	1.000	2.340e-12
				85			XCorr	5.433	1.000	3.963e-16
				109					0.999
				111a	0.812	0.047		41.800			1.117
				111b	0.812	0.047		41.800			1.117
				111c	0.792	0.028		41.800			1.117
				111d	0.792	0.028		41.800			1.117
				114			MaxQuant score	331.380	1.000	0.000e+0
				136	-0.042	0.370	MASCOT score	103.100			1.109
			EQFEDLYEQDGDVTPR	38			MASCOT Score	83.010			-1.061
				44			XCorr	5.346
				60			MASCOT Score	70.880			-1.061
				66			MaxQuant Score	186.150			-0.817
				83			MASCOT Score	86.000			-0.000
				84a			XCorr	3.830	1.000	2.616e-3
				85			XCorr	4.039	1.000	2.852e-12
				100			XCorr	5.316	1.000	1.140e-6
				106			MASCOT Score	56.000
ph	S	236	EQFEDLYEQDGDVTPRNSSPPSPFHPAAYK	83			MASCOT Score	48.000			-0.005
			EQFEDLYEQDGDVTPRNSSPPSPFHPAAYK	94			MaxQuant Score	71.470	0.831	2.000e-3	2.353
			NSSPPSPFHPAAYK	38			MASCOT Score	42.160
				45			MaxQuant Score	45.280
				83			MASCOT Score	43.000			0.001
				88			MASCOT Score	42.000	0.994		0.850
				106			MASCOT Score	23.000
				114			MaxQuant score	191.510	0.999	1.648e-31
ph	S	237	EQFEDLYEQDGDVTPRNSSPPSPFHPAAYK	94			MaxQuant Score	71.470	0.830	2.000e-3	2.353
			EQFEDLYEQDGDVTPRNSSPPSPFHPAAYK	100			XCorr	4.482	0.820	2.033e-2
			NSSPPSPFHPAAYK	83			MASCOT Score	42.000			-0.001
				84b			XCorr	3.030	0.889	2.712e-2
				88			MASCOT Score	42.000	0.942		0.230
				100			XCorr	3.380	0.943	3.532e-3
				106			MASCOT Score	29.000
				109					0.952
				114			MaxQuant score	168.450	0.999	1.314e-15
ph	S	240	EQFEDLYEQDGDVTPRNSSPPSPFHPAAYK	83			MASCOT Score	48.000			-0.005
				94			MaxQuant Score	71.470	0.957	2.000e-3	-0.070
				100			XCorr	4.482	0.841	2.033e-2
			NSSPPSPFHPAAYK	38			MASCOT Score	42.710			-1.591
				44			XCorr	3.227
				45			MaxQuant Score	141.340
				46			MASCOT Score	55.040			0.343
				60			MASCOT Score	44.600			-0.794
				83			MASCOT Score	43.000			0.001
				84b			XCorr	3.030	1.000	2.712e-2
				85			XCorr	3.330	1.000	2.369e-2
				88			MASCOT Score	64.000	1.000		-0.070
				100			XCorr	3.380	1.000	3.532e-3
				106			MASCOT Score	36.000
				109					1.000
				114			MaxQuant score	196.470	1.000	1.009e-31
ph	Y	247	NSSPPSPFHPAAYK	83			MASCOT Score	22.000			0.000
ph	S	254	TSDQRSNHGKEQIEDFYEQDDDVTPR	48			MASCOT Score	48.590
			SNHGKEQIEDFYEQDDDVTPR	38			MASCOT Score	83.600
				85			XCorr	3.734	1.000	1.204e-8
				114			MaxQuant score	120.130	1.000	3.941e-18
ph	T	272	EQIEDFYEQDDDVTPRNSSPPSPLHPAASHSPPPPQPYR	100			XCorr	4.919	0.928	2.732e-3
			SNHGKEQIEDFYEQDDDVTPR	38			MASCOT Score	72.240			-0.832
			SNHGKEQIEDFYEQDDDVTPR	85			XCorr	3.734	1.000	1.204e-8
			EQIEDFYEQDDDVTPR	38			MASCOT Score	90.910			-1.474
				44			XCorr	5.482
				60			MASCOT Score	63.100			-1.955
				66			MaxQuant Score	215.650			0.538
				83			MASCOT Score	90.000			-0.001
				84a			XCorr	5.350	1.000	1.297e-3
				84b			XCorr	4.390	1.000	1.700e-5
				85			XCorr	4.495	1.000	4.432e-10
				88			MASCOT Score	34.000	1.000		-0.120
				100			XCorr	5.264	1.000	3.019e-6
				106			MASCOT Score	70.000
				111a	0.658	0.000		103.700			1.078
				111b	0.658	0.000		103.700			1.078
				111c	0.987	0.000		103.700			1.078
				111d	0.987	0.000		103.700			1.078
				114			MaxQuant score	363.870	1.000	0.000e+0
ph	S	276	NSSPPSPLHPAASHSPPPPQPYR	114			MaxQuant score	186.680	0.998	0.000e+0
ph	S	277	EQIEDFYEQDDDVTPRNSSPPSPLHPAASHSPPPPQPYR	100			XCorr	4.919	0.793	2.732e-3
			NSSPPSPLHPAASHSPPPPQPYR	88			MASCOT Score	55.000	0.977		-0.880
			NSSPPSPLHPAASHSPPPPQPYR	114			MaxQuant score	162.100	0.948	4.857e-39
ph	S	280	NSSPPSPLHPAASHSPPPPQPYR	45			MaxQuant Score	52.866
				88			MASCOT Score	59.000	0.990		-0.660
				100			XCorr	3.432	0.930	7.612e-2
				114			MaxQuant score	207.720	1.000	0.000e+0
ph	S	289	NSSPPSPLHPAASHSPPPPQPYR	44			XCorr	4.307
				85			XCorr	3.435	0.826	6.738e-5
				88			MASCOT Score	59.000	1.000		-0.660
				100			XCorr	3.432	0.843	7.612e-2
				114			MaxQuant score	173.040	0.999	1.401e-45
ph	Y	296	NSSPPSPLHPAASHSPPPPQPYRTPDHR	44			XCorr	3.882
ph	S	304	RSHQDNEDFEAMYELDGDLIHQK	114			MaxQuant score	114.680	1.000	5.574e-17
			SHQDNEDFEAMYELDGDLIHQK	44			XCorr	7.512
			SHQDNEDFEAMYELDGDLIHQK	100			XCorr	3.631	1.000	7.033e-5
ph	S	363	IVSENSTPVHHNYQIVAAETYEQDK	48			MASCOT Score	44.020
				83			MASCOT Score	60.000			-0.002
				85			XCorr	4.237	0.914	3.752e-2
				100			XCorr	5.380	0.859	1.065e-4
				106			MASCOT Score	32.000
				114			MaxQuant score	316.130	1.000	0.000e+0
ph	S	366	IVSENSTPVHHNYQIVAAETYEQDK	83			MASCOT Score	38.000			-0.004
ph	S	366	IVSENSTPVHHNYQIVAAETYEQDK	106			MASCOT Score	32.000
ph	T	367	IVSENSTPVHHNYQIVAAETYEQDK	83			MASCOT Score	60.000			-0.002
				100			XCorr	6.697	0.802	3.436e-8
				106			MASCOT Score	34.000
				114			MaxQuant score	234.720	0.997	0.000e+0
ph	Y	373	IVSENSTPVHHNYQIVAAETYEQDK	83			MASCOT Score	51.000			0.000
				84b			XCorr	4.930	0.895	4.140e-16
				106			MASCOT Score	32.000
ph	S	422	NYESGKEESQSMISEAYVSVANYR	114			MaxQuant score	129.880	0.946	2.612e-28
ph	S	422	EESQSMISEAYVSVANYR	100			XCorr	3.722	0.911	1.116e-5
ph	S	598	NLDLFQSK	114			MaxQuant score	83.862	1.000	7.968e-3

Sequence

Length: 612

MDFFTSSKAKKDSKKSSGLFGKKTVSKSTPGSPAHPPGARSPPPSYLSNKRAETEYDFPMSNEQRPYWKQPASERVPNSHPRPPVYGYGTPDHRRDHGRERMEAMSYEPETNAPSSPYHPAGNRTPERPRKSTEYRREHQDRMYEADTRSNASPFHPFRSPSPSPFHTPDRRRDHYDMYEPEANTMLQNSAPGSPFHPAGSRSPPPYRTPDRRSNYDKEQFEDLYEQDGDVTPRNSSPPSPFHPAAYKTSDQRSNHGKEQIEDFYEQDDDVTPRNSSPPSPLHPAASHSPPPPQPYRTPDHRRSHQDNEDFEAMYELDGDLIHQKSAPPSPVHGPYYSSSDDDNHSTYLYPEIRSPLRSRIVSENSTPVHHNYQIVAAETYEQDKQFEPPELPDESQSFTMQEITKMRGLKNYESGKEESQSMISEAYVSVANYRVRQSVSETLQAIIDKHGDIAASSKLQAMATRSYYLESLAAVVMELKKTVLRDLTKTRVAEIAAVVKDMESVKINVSWLKTAVTELAEAVEYFGQYDTAKVEKEVCERDLTAKKGEMEEMTAELVKREKEIKECREKVTVVAGRLGQLEMKGSKLNKNLDLFQSKVHKFQGEAVLLHL

ID	PTM Type	Color
ph	Phosphorylation	X

No domains or active sites found for this protein.

AT4G38550.1

Arabidopsis thaliana [ath]

phospholipase-like protein (PEARLI 4) family protein

45 PTM sites : 1 PTM type

PLAZA: AT4G38550

Gene Family: HOM05D002972

Other Names: NULL

Uniprot

A0A654FWP5

Q9C5F6

Link out to other resources with this protein ID : TAIR | PeptideAtlas | ARAPORT | PhosPhAt

PTMs

Sequence

Length: 612

BLAST

Perform a BLAST search for this sequence, or a part of this sequence (minimum 50 characters)
A downloadable tutorial can be found here

AT4G38550.1

Arabidopsis thaliana [ath]

phospholipase-like protein (PEARLI 4) family protein

45 PTM sites : 1 PTM type

PLAZA: AT4G38550

Gene Family: HOM05D002972

Other Names: NULL

Uniprot

A0A654FWP5

Q9C5F6

Link out to other resources with this protein ID : TAIR | PeptideAtlas | ARAPORT | PhosPhAt

PTMs

Sequence

Length: 612

BLAST

Perform a BLAST search for this sequence, or a part of this sequence (minimum 50 characters)A downloadable tutorial can be found here

Perform a BLAST search for this sequence, or a part of this sequence (minimum 50 characters)
A downloadable tutorial can be found here